Publications

References

Das, J., Chakraborty, S., Podder, S., Ghosh, T.C., 2013. Complex-forming proteins escape the robust regulations of miRNA in human. FEBS letters 587, 2284–2287.

Das, J., Ghosh, T.C., 2016. In-silico studies of micrornas regulation in higher eukaryotes from the perspective of molecular evolution (PhD thesis). Bose Institute.

Das, J., Idh, N., Sikkeland, L.I.B., Paues, J., Lerm, M., 2021. DNA methylome-based validation of induced sputum as an effective protocol to study lung immunity: Construction of a classifier of pulmonary cell types. Epigenetics 1–12.

Das, J., Podder, S., Ghosh, T.C., 2014. Insights into the miRNA regulations in human disease genes. BMC genomics 15, 1–7.

Das, J., Verma, D., Gustafsson, M., Lerm, M., 2019. Identification of DNA methylation patterns predisposing for an efficient response to BCG vaccination in healthy BCG-naı̈ve subjects. Epigenetics 14, 589–601.

Gupta, S., Kumari, K., Das, J., Lata, C., Puranik, S., Prasad, M., 2011. Development and utilization of novel intron length polymorphic markers in foxtail millet (setaria italica (l.) P. beauv.). Genome 54, 586–602.

Huoman, J., Sayyab, S., Apostolou, E., Karlsson, L., Porcile, L., Rizwan, M., Sharma, S., Das, J., Rosen, A., Lerm, M., 2021a. Mild SARS-CoV-2 infection modifies DNA methylation of peripheral blood mononuclear cells from COVID-19 convalescents. medRxiv.

Huoman, J., Sayyab, S., Apostolou, E., Karlsson, L., Porcile, L., Rizwan, M., Sharma, S., Das, J., Rosén, A., Lerm, M., 2021b. Epigenome-wide DNA methylation profiling of healthy COVID-19 recoverees reveals a unique signature in circulating immune cells.

Huoman, J., Sayyab, S., Apostolou, E., Karlsson, L., Porcile, L., Rizwan, M., Sharma, S., Das, J., Rosén, A., Lerm, M., 2022. Epigenetic rewiring of pathways related to odour perception in immune cells exposed to SARS-CoV-2 in vivo and in vitro. Epigenetics 1–17.

Kalsum, S., Andersson, B., Das, J., Schön, T., Lerm, M., 2021. A high-throughput screening assay based on automated microscopy for monitoring antibiotic susceptibility of mycobacterium tuberculosis phenotypes. BMC microbiology 21, 1–14.

Karlsson, L., Das, J., Nilsson, M., Tyrén, A., Pehrson, I., Idh, N., Sayyab, S., Paues, J., Ugarte-Gil, C., Méndez-Aranda, M., others, 2021. A differential DNA methylome signature of pulmonary immune cells from individuals converting to latent tuberculosis infection. Scientific reports 11, 1–13.

Lerm, M., Das, J., 2022. Biomarker for detection of mycobacterial exposure and infection.

Lerm, M., Das, J., Sayyab, S., 2022. Method for determining sars-cov-2 exposure with or without remaining symptoms.

Lundquist, H., Andersson, H., Chew, M.S., Das, J., Turkina, M.V., Welin, A., 2022. The Olfm4-defined human neutrophil subsets differ in proteomic profile in septic shock. bioRxiv.

Lysiak, M., Das, J., Soderkvist, P., Malmstrom, A., 2022. Methylome analysis of short versus long-term GBM survivors from the nordic randomised, phase 3 trial. Brain Tumor Research and Treatment 10.

Pehrson, I., Braian, C., Karlsson, L., Idh, N., Danielsson, E.K., Andersson, B., Paues, J., Das, J., Lerm, M., 2021. DNA methylation profiling of immune cells from tuberculosis-exposed individuals overlaps with BCG-induced epigenetic changes and correlates with the emergence of anti-mycobacterial’corralling cells’. medRxiv.

Sen, K., Bhattacharyya, D., Sarkar, A., Das, J., Maji, N., Basu, M., Ghosh, Z., Ghosh, T.C., 2018. Exploring the major cross-talking edges of competitive endogenous RNA networks in human chronic and acute myeloid leukemia. Biochimica et Biophysica Acta (BBA)-General Subjects 1862, 1883–1892.

Singhania, A., Dubelko, P., Kuan, R., Chronister, W.D., Muskat, K., Das, J., Phillips, E.J., Mallal, S.A., Seumois, G., Vijayanand, P., others, 2021. CD4+ CCR6+ t cells dominate the BCG-induced transcriptional signature. EBioMedicine 74, 103746.

Zhu, G.H., Azharuddin, M., Islam, R., Rahmoune, H., Deb, S., Kanji, U., Das, J., Osterrieth, J., Aulakh, P., Ibrahim-Hashi, H., others, 2021. Innate immune invisible ultrasmall gold nanoparticles—framework for synthesis and evaluation. ACS Applied Materials & Interfaces 13, 23410–23422.